Relationship and distribution of Salmonella enterica serovar I 4,[5],12:i:- strain sequences in the NCBI Pathogen Detection database.
Julian M TrachselBradley L BearsonBrian W BrunelleShawn M D BearsonPublished in: BMC genomics (2022)
Our study illustrates how analysis of genomic sequences from the NCBI Pathogen Detection database can be utilized to identify the prevalence of genetic features such as antimicrobial resistance, metal tolerance, and virulence genes that may be responsible for the successful emergence of bacterial foodborne pathogens.
Keyphrases
- antimicrobial resistance
- genome wide
- loop mediated isothermal amplification
- real time pcr
- candida albicans
- copy number
- label free
- adverse drug
- risk factors
- pseudomonas aeruginosa
- escherichia coli
- biofilm formation
- multidrug resistant
- sensitive detection
- transcription factor
- bioinformatics analysis
- genome wide analysis