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Novel heavy metal resistance gene clusters are present in the genome of Cupriavidus neocaledonicus STM 6070, a new species of Mimosa pudica microsymbiont isolated from heavy-metal-rich mining site soil.

Agnieszka KlonowskaLionel MoulinJulie Kaye ArdleyFlorence BraunMargaret Mary GollagherJaco Daniel ZandbergDora Vasileva MarinovaMarcel HuntemannT B K ReddyNeha Jacob VargheseTanja WoykeNatalia IvanovaRekha SeshadriNikos KyrpidesWayne Gerald Reeve
Published in: BMC genomics (2020)
STM 6070 belongs to a new Cupriavidus species, for which we have proposed the name Cupriavidus neocaledonicus sp. nov.. STM6070 harbours a pSym with a high degree of gene conservation to the pSyms of M. pudica-nodulating C. taiwanensis strains, probably as a result of recent horizontal transfer. The presence of specific HMR clusters, associated with transposase genes, suggests that the selection pressure of the New Caledonian ultramafic soils has driven the specific adaptation of STM 6070 to heavy-metal-rich soils via horizontal gene transfer.
Keyphrases
  • heavy metals
  • genome wide
  • risk assessment
  • health risk assessment
  • genome wide identification
  • health risk
  • copy number
  • sewage sludge
  • escherichia coli
  • dna methylation
  • genome wide analysis
  • human health
  • plant growth