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Epigenetics and suicide: investigating altered H3K14ac unveiled differential expression in ADORA2A , B4GALT2  and MMP14 .

Iris Šalamon ArčanKatarina KouterTomaž ZupancAlja Videtič Paska
Published in: Epigenomics (2024)
Background: Environmental factors make an important contribution to suicide. Histone tails are prone to different modifications, leading to changes of chromatin (de)condensation and consequently gene expression. Materials & methods: Level of H3K14ac was studied with chromatin immunoprecipitation followed by high-throughput DNA sequencing. Genes were further validated with RT-qPCR; using hippocampal tissue. Results: We showed lowered H3K14ac levels in individuals who died by suicide. The genes ADORA2A , B4GALT2  and MMP14 showed differential expression in individuals who died by suicide. Identified genetic and protein interactions among genes show interactions with suicide-related genes. Conclusion: Further investigations of histone modifications in association with DNA methylation and miRNA are needed to expand our knowledge of the genes that could significantly contribute to suicide.
Keyphrases
  • genome wide
  • dna methylation
  • gene expression
  • high throughput
  • copy number
  • genome wide identification
  • dna damage
  • healthcare
  • transcription factor
  • bioinformatics analysis
  • single cell
  • cell free
  • nucleic acid