TAP: a targeted clinical genomics pipeline for detecting transcript variants using RNA-seq data.

Readman ChiuKa Ming NipJustin ChuInanc Birol

Published in: BMC medical genomics (2018)

We demonstrated that TAP is a fast and robust RNA-seq variant detection pipeline that is potentially amenable to clinical applications. TAP is available at http://www.bcgsc.ca/platform/bioinfo/software/pavfinder.

Keyphrases

rna seq
single cell
high throughput
big data
copy number
electronic health record
cancer therapy
machine learning
label free
dna methylation
real time pcr
gene expression
genome wide
deep learning