Comparative genomics reveals phylogenetic distribution patterns of secondary metabolites in Amycolatopsis species.
Martina AdamekMohammad AlanjaryHelena Sales-OrtellsMichael GoodfellowAlan T BullAnika WinklerDaniel WibbergJörn KalinowskiNadine ZiemertPublished in: BMC genomics (2018)
Using a comparative genomics approach, it was possible to determine the potential of the genus Amycolatopsis to produce a huge diversity of secondary metabolites. Furthermore, the analysis demonstrates that horizontal and vertical gene transfer play an important role in the acquisition and maintenance of valuable secondary metabolites. Our results cast light on the interconnections between secondary metabolite gene clusters and provide a way to prioritize biosynthetic pathways in the search and discovery of novel compounds.