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Total RNA sequencing reveals gene expression and microbial alterations shared by oral pre-malignant lesions and cancer.

Mohammed Muzamil KhanJennifer FrustinoAlessandro VillaBach-Cuc NguyenSook-Bin WooWilliam Evan JohnsonXaralabos VarelasMaria KukuruzinskaStephano Monti
Published in: bioRxiv : the preprint server for biology (2023)
) and dysplasia, comparing these profiles with OSCC and normal oral mucosa. Significant similarities between PMLs and OSCC were observed, with PMLs manifesting several cancer hallmarks, including oncogenic and immune pathways. The study also demonstrates associations between the abundance of multiple microbial species and PML groups, suggesting a potential contribution of the oral microbiome to the early stages of OSCC development. The study offers insights into the nature of the molecular, cellular and microbial heterogeneity of oral PMLs and suggests that molecular and clinical refinement of PMLs may provide opportunities for early disease detection and interception.
Keyphrases
  • gene expression
  • microbial community
  • single cell
  • papillary thyroid
  • squamous cell
  • dna methylation
  • climate change
  • squamous cell carcinoma
  • risk assessment
  • human health