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Whole genome comparisons reveal panmixia among fall armyworm (Spodoptera frugiperda) from diverse locations.

Katrina A SchlumKurt LamourCaroline Placidi de BortoliRahul BanerjeeRobert MeagherEliseu PereiraMaria Gabriela MuruaGregory A SwordAshley E TessnowDiego Viteri DillonAngela M Linares RamirezKomivi S AkutseRebecca Schmidt-JeffrisFangneng HuangDominic ReisigScott J EmrichJuan Luis Jurat-Fuentes
Published in: BMC genomics (2021)
Our research is the largest diverse collection of United States S. frugiperda whole genome sequences characterized to date, covering eight continental states and a USA territory (Puerto Rico). The genomic resources presented provide foundational information to understand gene flow at the whole genome level among S. frugiperda populations. Based on the genomic similarities found between host strains and laboratory vs. field samples, our findings validate the experimental use of laboratory strains and the host strain differentiation based on mitochondria and sex-linked genetic markers extends to minor genome wide differences with some exceptions showing mixture between host strains is likely occurring in field populations.
Keyphrases
  • genome wide
  • copy number
  • escherichia coli
  • dna methylation