Fluorinated Prolines as Conformational Tools and Reporters for Peptide and Protein Chemistry.
Sanne J M VerhoorkPatrick M KilloranChristopher R CoxonPublished in: Biochemistry (2018)
Amide bonds at the proline nitrogen are particularly susceptible to rotation, affording cis and trans isomers. Installation of a stereochemically defined electron-withdrawing fluorine atom or fluorinated groups has the power to influence the cis- trans conformational preferences of the amide bond in X-(F)Pro (where X = any other amino acid). Advantageously, this also provides a sensitive reporter for 19F nuclear magnetic resonance (NMR) studies of protein conformation, interactions, and dynamics. We deliberately use the term "fluorinated prolines" as an all-encompassing term to describe proline analogues containing one or more fluorine atoms and to avoid confusion with the more well-known 4-fluoroprolines. This review presents a critical discussion of the growing repertoire of fluorinated prolines that have been described and, importantly, provides a comparison of their uses and relative influence on amide-bond conformation and discusses the significant potential of using 19F NMR as a tool to probe conformational changes in polypeptides.
Keyphrases
- magnetic resonance
- molecular dynamics simulations
- molecular dynamics
- amino acid
- molecular docking
- single molecule
- preterm infants
- positron emission tomography
- high resolution
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- protein protein
- electron transfer
- gestational age
- binding protein
- contrast enhanced
- crispr cas
- transition metal
- living cells
- magnetic resonance imaging
- computed tomography
- quantum dots
- crystal structure
- anti inflammatory
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