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Assessment of bacterial and viral gut communities in healthy and tumoral colorectal tissue using RNA and DNA deep sequencing.

Ainhoa Garcia-SerranoDhananjay MukhedkarEmilie HultinUlla RudsanderYvonne WettergrenAgustín Enrique UreJoakim DillnerLaila Sara Arroyo Mühr
Published in: Cancer medicine (2023)
Joint assessment of the metagenome (DNA) and the metatranscriptome (RNA) at the species level provided a huge coverage for both bacteria and virus and identifies differential specific bacterial species as tumor associated.
Keyphrases
  • nucleic acid
  • circulating tumor
  • cell free
  • single molecule
  • sars cov
  • genome wide
  • genetic diversity
  • dna methylation