Selective modulation of local linkages between active transcription and oxidative demethylation activity shapes cardiomyocyte-specific gene-body epigenetic status in mice.
Mayumi OdaShunichi WakabayashiN Ari WijetungaShinsuke YuasaHirokazu EnomotoRuri KanedaSung Han YoonNishant MittalQiang JingMasako SuzukiJohn M GreallyKeiichi FukudaShinji MakinoPublished in: BMC genomics (2018)
As 5hmC enrichment proceeded to hypomethylated GBRs, we considered that hypomethylation may not represent a static state but rather an equilibrium state of turnover due to the balance between local methylation linked to transcription and Tet oxidative modification causing demethylation. Accordingly, we conclude that demethylation in CMs can be a used to establish such cell-type-specific epigenetic domains in relation to liver cells. The establishment of cell-type-specific epigenetic control may also change genomic contexts of evolution and may contribute to the development of cell-type-specific transcriptional coordination.