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Detection of Drechslera avenae (Eidam) Sharif [Helminthosporium avenae (Eidam)] in Black Oat Seeds (Avena strigosa Schreb) Using Multispectral Imaging.

Fabiano França-SilvaCarlos Henrique Queiroz RegoFrancisco Guilhien Gomes-JuniorMaria Heloisa Duarte de MoraesAndré Dantas de MedeirosClíssia Barboza da Silva
Published in: Sensors (Basel, Switzerland) (2020)
Conventional methods for detecting seed-borne fungi are laborious and time-consuming, requiring specialized analysts for characterization of pathogenic fungi on seed. Multispectral imaging (MSI) combined with machine vision was used as an alternative method to detect Drechslera avenae (Eidam) Sharif [Helminthosporium avenae (Eidam)] in black oat seeds (Avena strigosa Schreb). The seeds were inoculated with Drechslera avenae (D. avenae) and then incubated for 24, 72 and 120 h. Multispectral images of non-infested and infested seeds were acquired at 19 wavelengths within the spectral range of 365 to 970 nm. A classification model based on linear discriminant analysis (LDA) was created using reflectance, color, and texture features of the seed images. The model developed showed high performance of MSI in detecting D. avenae in black oat seeds, particularly using color and texture features from seeds incubated for 120 h, with an accuracy of 0.86 in independent validation. The high precision of the classifier showed that the method using images captured in the Ultraviolet A region (365 nm) could be easily used to classify black oat seeds according to their health status, and results can be achieved more rapidly and effectively compared to conventional methods.
Keyphrases
  • deep learning
  • fluorescence imaging
  • optical coherence tomography
  • convolutional neural network
  • high resolution
  • photodynamic therapy
  • machine learning
  • magnetic resonance imaging
  • contrast enhanced
  • real time pcr