Amplicons, Metagenomes, and Metatranscriptomes from Sediment and Water.

Madison R NewmanDarlenys SanchezAnna M AcostaBernadette J Connors

Published in: Microbiology resource announcements (2023)

High fecal indicator bacterium (FIB) counts in water have been found to correlate with high sediment FIB counts. To determine the other bacterial populations in common between the two substrates, sediment and water samples from suburban waters known to be impacted by stormwater runoff were examined using next-generation sequencing.

Keyphrases

heavy metals
polycyclic aromatic hydrocarbons
risk assessment
copy number
gene expression
dna methylation
genome wide