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Integration of datasets for individual prediction of DNA methylation-based biomarkers.

Charlotte MerzbacherBarry RyanThibaut GoldsboroughRobert F HillaryArchie CampbellLee MurphyAndrew M McIntoshDavid LiewaldSarah E HarrisAllan F McRaeSimon R CoxTimothy I CanningsCatalina A VallejosDaniel L McCartneyRiccardo E Marioni
Published in: Genome biology (2023)
Normalisation methods returning similar EpiScores, whether cohorts are analysed separately or together, will minimise technical variation when projecting new data onto a reference panel. These methods are important for cases where raw data is unavailable and joint normalisation of cohorts is computationally expensive.
Keyphrases
  • dna methylation
  • electronic health record
  • big data
  • gene expression
  • genome wide
  • rna seq
  • single cell
  • copy number