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Experimental evidence that network topology can accelerate the spread of beneficial mutations.

Partha Pratim ChakrabortyLouis R NemzerRees Kassen
Published in: Evolution letters (2023)
Whether and how the spatial arrangement of a population influences adaptive evolution has puzzled evolutionary biologists. Theoretical models make conflicting predictions about the probability that a beneficial mutation will become fixed in a population for certain topologies like stars, in which "leaf" populations are connected through a central "hub." To date, these predictions have not been evaluated under realistic experimental conditions. Here, we test the prediction that topology can change the dynamics of fixation both in vitro and in silico by tracking the frequency of a beneficial mutant under positive selection as it spreads through networks of different topologies. Our results provide empirical support that meta-population topology can increase the likelihood that a beneficial mutation spreads, broaden the conditions under which this phenomenon is thought to occur, and points the way toward using network topology to amplify the effects of weakly favored mutations under directed evolution in industrial applications.
Keyphrases
  • heavy metals
  • minimally invasive
  • molecular docking
  • dna methylation
  • network analysis
  • genome wide
  • wastewater treatment
  • risk assessment