Prognostic value of intratumoral lymphocyte-to-monocyte ratio and M0 macrophage enrichment in tumor immune microenvironment of melanoma.
Neil K JairathMark W FarhaRuple JairathKelly L HarmsLam C TsoiTrilokraj TejasviPublished in: Melanoma management (2020)
Skin cutaneous melanoma is characterized by significant heterogeneity in its molecular, genomic and immunologic features. Whole transcriptome RNA sequencing data from The Cancer Genome Atlas of skin cutaneous melanoma (n = 328) was utilized. CIBERSORT was used to identify immune cell type composition, on which unsupervised hierarchical clustering was performed. Analysis of overall survival was performed using Kaplan-Meier estimates and multivariate Cox regression analyses. Membership in the lymphocyte:monocytelow, monocytehi gh and M0high cluster was an independently poor prognostic factor for survival (HR: 3.03; 95% CI: 1.12-8.20; p = 0.029) and correlated with decreased predicted response to immune checkpoint blockade. In conclusion, an M0-macrophage-enriched, lymphocyte-to-monocyte-ratio-low phenotype in the primary melanoma tumor site independently characterizes an aggressive phenotype that may differentially respond to treatment.
Keyphrases
- single cell
- peripheral blood
- prognostic factors
- rna seq
- skin cancer
- dendritic cells
- adipose tissue
- endothelial cells
- soft tissue
- machine learning
- genome wide
- stem cells
- basal cell carcinoma
- gene expression
- free survival
- data analysis
- single molecule
- combination therapy
- dna methylation
- immune response
- artificial intelligence
- water quality