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DNA-Binding Properties of Bis- N -substituted Tetrandrine Derivatives.

Sandra Mónica González-MartínezDrochss Pettry Valencia-OchoaJuan Carlos Gálvez-RuizMario Alberto Leyva-PeraltaOctavio Juárez-SánchezMaría A Islas-OsunaViviana Isabel Calvillo-PáezHerbert HöpflRamón A Iñiguez-PalomaresFernando Rocha-AlonzoKaren Ochoa Lara
Published in: ACS omega (2022)
A series of bis- N -substituted tetrandrine derivatives carrying different aromatic substituents attached to both nitrogen atoms of the natural alkaloid were studied with double-stranded model DNAs (dsDNAs) to examine the binding properties and mechanism. Variable-temperature molecular recognition studies using UV-vis and fluorescence techniques revealed the thermodynamic parameters, Δ H , Δ S , and Δ G , showing that the tetrandrine derivatives exhibit high affinity toward dsDNA ( K ≈ 10 5 -10 7 M -1 ), particularly the bis(methyl)anthraquinone (BAqT) and bis(ethyl)indole compounds (BInT). Viscometry experiments, ethidium displacement assays, and molecular modeling studies enabled elucidation of the possible binding mode, indicating that the compounds exhibit a synergic interaction mode involving intercalation of one of the N -aryl substituents and interaction of the molecular skeleton in the major groove of the dsDNA. Cytotoxicity tests of the derivatives with tumor and nontumor cell lines demonstrated low cytotoxicity of these compounds, with the exception of the bis(methyl)pyrene (BPyrT) derivative, which is significantly more cytotoxic than the remaining derivatives, with IC 50 values against the LS-180, A-549, and ARPE-19 cell lines that are similar to natural tetrandrine. Finally, complementary electrochemical characterization studies unveiled good electrochemical stability of the compounds.
Keyphrases
  • ionic liquid
  • dna binding
  • structure activity relationship
  • transcription factor
  • case control
  • binding protein
  • single molecule
  • single cell
  • molecularly imprinted
  • mass spectrometry
  • aqueous solution