PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism.
Gabriela Rudd GarcesMaria Elena TurbaMyriam MuracchiniAlessia DianaVidhya JagannathanFabio GentiliniTosso LeebPublished in: Genes (2021)
Dwarfism phenotypes occur in many species and may be caused by genetic or environmental factors. In this study, we investigated a family of nine Dogo Argentino dogs, in which two dogs were affected by disproportionate dwarfism. Radiographs of an affected dog revealed a decreased level of endochondral ossification in its growth plates, and a premature closure of the distal ulnar physes. The pedigree of the dogs presented evidence of monogenic autosomal recessive inheritance; combined linkage and homozygosity mapping assigned the most likely position of a potential genetic defect to 34 genome segments, totaling 125 Mb. The genome of an affected dog was sequenced and compared to 795 control genomes. The prioritization of private variants revealed a clear top candidate variant for the observed dwarfism. This variant, PRKG2:XM_022413533.1:c.1634+1G>T, affects the splice donor site and is therefore predicted to disrupt the function of the PKRG2 gene encoding protein, kinase cGMP-dependent type 2, a known regulator of chondrocyte differentiation. The genotypes of the PRKG2 variant were perfectly associated with the phenotype in the studied family of dogs. PRKG2 loss-of-function variants were previously reported to cause disproportionate dwarfism in humans, cattle, mice, and rats. Together with the comparative data from other species, our data strongly suggest PRKG2:c.1634+1G>T to be a candidate causative variant for the observed dwarfism phenotype in Dogo Argentino dogs.
Keyphrases
- genome wide
- copy number
- protein kinase
- mitochondrial dna
- healthcare
- single cell
- nitric oxide
- high resolution
- dna methylation
- type diabetes
- gene expression
- risk assessment
- adipose tissue
- skeletal muscle
- metabolic syndrome
- deep learning
- transcription factor
- autism spectrum disorder
- atomic force microscopy
- duchenne muscular dystrophy