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Titration of Apparent In-Cellula Affinities of Protein-Protein Interactions.

David CluetBlandine VergierNicolas-Pierre LevyLucie DehauAlexandre ThurmanIkram AmriMartin Spichty
Published in: Chembiochem : a European journal of chemical biology (2022)
A genetic assay permits simultaneous quantification of two interacting proteins and their bound fraction at the single-cell level using flow cytometry. Apparent in-cellula affinities of protein-protein interactions can be extracted from the acquired data through a titration-like analysis. The applicability of this approach is demonstrated on a diverse set of interactions with proteins from different families and organisms and with in-vitro dissociation constants ranging from picomolar to micromolar.
Keyphrases
  • flow cytometry
  • single cell
  • high throughput
  • diffusion weighted imaging
  • rna seq
  • electronic health record
  • genome wide
  • big data
  • gene expression
  • gram negative
  • machine learning
  • data analysis
  • electron transfer