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The Osteocyte Transcriptome: Discovering Messages Buried Within Bone.

Natalie Ky WeeNatalie A SimsRoy Morello
Published in: Current osteoporosis reports (2021)
Three common methods are used to prepare samples to examine osteocyte gene expression: digestion followed by sorting, laser capture microscopy, and the isolation of cortical bone shafts. All these methods present challenges in interpreting the data generated. Genes previously not known to be expressed by osteocytes have been identified and variations in osteocyte gene expression have been reported with age, sex, anatomical location, mechanical loading, and defects in bone strength. A substantial proportion of newly identified transcripts in osteocytes remain functionally undefined but several have been cross-referenced with functional data. Future work and improved methods (e.g. scRNAseq) likely provide useful resources for the study of osteocytes and important new information on the identity and functions of this unique cell type within the skeleton.
Keyphrases
  • gene expression
  • bone mineral density
  • dna methylation
  • genome wide
  • soft tissue
  • bone loss
  • electronic health record
  • bone regeneration
  • big data
  • rna seq
  • high speed
  • single cell
  • healthcare
  • body composition
  • deep learning