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K + -Specification with Flavone P0 Probe in a G-Quadruplex DNA.

Wenqin ZhouWang WanWenhui MiaoYu BaoLiu YuGuoqing JiaCan Li
Published in: Analytical chemistry (2024)
G-quadruplex (G4) DNA is considered as a prospective therapeutic target due to its potential biological significance. To understand G4 biological roles and function, a G4-specific fluorescent probe is necessary. However, it is difficult for versatile G4 to precisely recognize without perturbing their folding dynamics. Herein, we reported that flavone P0 can be a fluorescent probe for G4 DNA-specific recognition and have developed a highly selective detection of K + ion by dimeric G4/P0 system. When comparing various nucleic acid structures, including G4, i-motif, ss/ds-DNA, and triplex, an apparent fluorescence enhancement is observed in the presence of G4 DNA for 85-fold, but only 8-fold for non-G4 DNA. Furthermore, based on fluorescent probe of flavone P0 for G4 DNA screening, the noncovalent dimeric G4/P0 system is exploited as a K + sensor, that selectively responds to K + with a 513-fold fluorescence enhancement and a detection range for K + ion concentration from 0 to 500 mM. This K + sensor also has a remarkably anti-interference ability for other metal cations, especially for a high concentration of Na + . These results have demonstrated that flavone P0 is an efficient tool for monitoring G-quadruplex DNA and endows flavone P0 with bioanalytical and medicinal applications.
Keyphrases
  • single molecule
  • fluorescent probe
  • living cells
  • circulating tumor
  • nucleic acid
  • cell free
  • magnetic resonance
  • ionic liquid
  • molecular dynamics simulations