Next generation phenotyping using narrative reports in a rare disease clinical data warehouse.
Nicolas GarcelonAntoine NeurazRémi SalomonNadia Bahi-BuissonJeanne AmielCapucine PicardNizar MahlaouiVincent BenoitAnita BurgunBastien RancePublished in: Orphanet journal of rare diseases (2018)
Clinical Data Warehouses can be used to perform Next Generation Phenotyping, especially in the context of rare diseases. We have developed a method to detect phenotypes associated with a group of patients using medical concepts extracted from free-text clinical narratives.