Intolerance of profligacy: an aptamer concentration gradient-tailored unicellular array for high-throughput biologics-mediated phenotyping.
Xuan ZhangYa-Nan ZhaoXing WeiXue MenCheng-Xin WuJun-Jie BaiTing YangMing-Li ChenJian-Hua WangPublished in: Lab on a chip (2022)
In aptamer-based assay schemes, aptamer probes not labeled with biomarkers have to be eliminated before testing, which may lead to a tremendous waste of precious probes. We herein propose a microfluidics system integrating an aptamer concentration gradient generator (Apt-CGG) and a dual single-cell culturing array (D-SCA), termed Mi-Apt-SCA. This facilitates the precise construction of a nanoscale-gradient microenvironment and the high-throughput profiling of single-cell growth/phenotypes <i>in situ</i> with the minimal consumption of Apt-probe. Unlike previous snakelike mixers, the choreographed winding-ravined aptamer dual-spiral micromixer (Apt-WD-mixer) in Apt-CGG could allow thorough blending to generate linear concentration gradients of aptamer (quasi-non-Newtonian fluid) under the action of continuous fluidic wiggles and bidirectional <i>Dean</i> flow. In contrast to other trap-like systems, the mild vortex allows single-cell growth in an ultra-tender fluidic microenvironment using triple-jarless single-cell culture capsules (TriJ-SCCs) in D-SCA (shear stress: 3.43 × 10<sup>-5</sup> dynes per cm<sup>2</sup>). The minimum dosage of aptamer probe required for exploring PDL1 protein expression in two hepatoma cell lines is only one-900th of that required by conventional protocols. In addition, this approach facilitated the profiling of ITF-β/cisplatin-mediated single-cell/cell-cluster phenotypes.
Keyphrases
- high throughput
- single cell
- gold nanoparticles
- sensitive detection
- rna seq
- magnetic nanoparticles
- label free
- stem cells
- living cells
- quantum dots
- small molecule
- magnetic resonance
- high resolution
- heavy metals
- single molecule
- cell therapy
- photodynamic therapy
- mass spectrometry
- pet imaging
- fluorescence imaging
- magnetic resonance imaging
- sewage sludge