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Computational study revealed a "pull-push" radical transfer mechanism of Mmp10-catalyzed C δ -methylation of arginine.

Wen-Hao DengRong-Zhen Liao
Published in: Chemical communications (Cambridge, England) (2022)
Mmp10 is a B 12 -dependent SAM radical enzyme that catalyzes C δ -methylation of arginine. The quantum chemical cluster calculations of Mmp10 revealed a "pull-push" radical transfer mechanism in which a 5'-deoxyadenosine radical first abstracts a hydrogen atom from the arginine residue and then methylcobalamin donates a methyl group to the arginine residue. The stereoselectivity and regioselectivity of Mmp10 originated in a specific substrate binding mode enabled by the active site.
Keyphrases
  • nitric oxide
  • amino acid
  • molecular dynamics
  • cell migration
  • dna methylation
  • genome wide
  • single cell
  • gene expression
  • dna binding
  • transcription factor