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[Methods for assessing the microbiological diversity of the ocular surface].

E S RodinaE I FettserIvan A Novikov
Published in: Vestnik oftalmologii (2024)
This review compares data from scientific studies on the microbial community of the ocular surface (OS) in conditionally healthy individuals using cultural methods (including culture-dependent diagnostic tests), microscopic and molecular genetic methods, and assesses the influence of research methods and sample preparation on the results. Concordance and discordance of the sets of identified microorganisms were analyzed using overlapping and non-overlapping methods of studying the microbial community of a healthy OS. The article presents tables showing the names of microorganisms that were identified in different sources. Cross-verification in taxa of different ranks helped confirm the following most frequently found microorganisms on healthy OS: coccomorphic microorganisms of the genera Staphylococcus , Micrococcus , Kocuria , Streptococcus , Enterococcus ; gram-positive spore-forming bacilli of the genera Bacillus and Paenibacillus ; gram-positive non-spore-forming rod-shaped bacteria, including Corynebacterium , but excluding Propionibacterium and Microbacterium ; gram-negative non-spore-forming rod-shaped microorganisms of the genera Moraxella and Serratia . The study also assessed the effect of wearing soft contact lenses on the composition of the microbial community of the OS.
Keyphrases
  • microbial community
  • gram negative
  • multidrug resistant
  • antibiotic resistance genes
  • bacillus subtilis
  • biofilm formation
  • escherichia coli
  • big data
  • gene expression
  • genome wide