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GERONIMO: A tool for systematic retrieval of structural RNAs in a broad evolutionary context.

Agata M KilarPetr FajkusJiří Fajkus
Published in: GigaScience (2023)
GERONIMO, built using Snakemake, has undergone extensive testing on hundreds of genomes, establishing itself as a valuable tool in the identification of ncRNA homologs across diverse taxonomic groups. Consequently, GERONIMO facilitates the investigation of the evolutionary patterns of functionally significant ncRNA players, whose understanding has previously been limited to individual organisms and close relatives.
Keyphrases
  • genome wide
  • dna methylation
  • gene expression