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The complete chloroplast genome sequence of Vitis pseudoreticulata.

Chao MaPeining FuLei WangLiping ZhaoWenping XuCaixi ZhangShiping WangJiang LuShiren Song
Published in: Mitochondrial DNA. Part B, Resources (2019)
Vitis pseudoreticulata is a wild Vitis species distributed in Southern China and wildly used to crossbreeding based on its resistance to moisture. In this study, the complete chloroplast genome of V. pseudoreticulata was assembled for the first time. The chloroplast genome was 161,065 bp in length, including two single-copy regions (19,083 and 89,276), which separated by a pair of inverted repeat regions. In totally, 132 genes were predicted, including 87 CDSs, 8 rRNA genes and 37 tRNA genes. The phylogenetic tree analysis showed that V. pseudoreticulata was the closest related to Vitis amurensis.
Keyphrases
  • genome wide
  • arabidopsis thaliana
  • bioinformatics analysis
  • genome wide identification
  • dna methylation
  • genome wide analysis
  • gene expression
  • genetic diversity
  • neural network
  • drug induced