A release of local subunit conformational heterogeneity underlies gating in a muscle nicotinic acetylcholine receptor.
Mackenzie J ThompsonFarid Mansoub BekarkhanechiAnna AnanchenkoHugues NuryJohn E BaenzigerPublished in: Nature communications (2024)
Synaptic receptors respond to neurotransmitters by opening an ion channel across the post-synaptic membrane to elicit a cellular response. Here we use recent Torpedo acetylcholine receptor structures and functional measurements to delineate a key feature underlying allosteric communication between the agonist-binding extracellular and channel-gating transmembrane domains. Extensive mutagenesis at this inter-domain interface re-affirms a critical energetically coupled role for the principal α subunit β1-β2 and M2-M3 loops, with agonist binding re-positioning a key β1-β2 glutamate/valine to facilitate the outward motions of a conserved M2-M3 proline to open the channel gate. Notably, the analogous structures in non-α subunits adopt a locally active-like conformation in the apo state even though each L9' hydrophobic gate residue in each pore-lining M2 α-helix is closed. Agonist binding releases local conformational heterogeneity transitioning all five subunits into a conformationally symmetric open state. A release of conformational heterogeneity provides a framework for understanding allosteric communication in pentameric ligand-gated ion channels.
Keyphrases
- molecular dynamics simulations
- molecular dynamics
- single cell
- dna binding
- single molecule
- binding protein
- small molecule
- minimally invasive
- high resolution
- transcription factor
- crispr cas
- machine learning
- skeletal muscle
- prefrontal cortex
- deep learning
- protein kinase
- mass spectrometry
- amino acid
- structural basis
- aqueous solution