Privacy-preserving distributed learning of radiomics to predict overall survival and HPV status in head and neck cancer.
Marta BogowiczArthur JochemsTimo M DeistStephanie Tanadini-LangShao Hui HuangBiu ChanJohn N WaldronScott V BratmanBrian O'SullivanOliver RiestererGabriela StuderJan UnkelbachSamir BarakatRuud H BrakenhoffIrene NautaSilvia E GazzaniGiuseppina CalaresoKathrin ScheckenbachFrank HoebersFrederik W R WesselingSimon KeekSebastian SanduleanuRalph T H LeijenaarMarije R VergeerC René LeemansChris H J TerhaardMichiel W M van den BrekelOlga Hamming-VriezeMartijn A van der HeijdenHesham M ElhalawaniClifton David FullerMatthias GuckenbergerPhilippe LambinPublished in: Scientific reports (2020)
A major challenge in radiomics is assembling data from multiple centers. Sharing data between hospitals is restricted by legal and ethical regulations. Distributed learning is a technique, enabling training models on multicenter data without data leaving the hospitals ("privacy-preserving" distributed learning). This study tested feasibility of distributed learning of radiomics data for prediction of two year overall survival and HPV status in head and neck cancer (HNC) patients. Pretreatment CT images were collected from 1174 HNC patients in 6 different cohorts. 981 radiomic features were extracted using Z-Rad software implementation. Hierarchical clustering was performed to preselect features. Classification was done using logistic regression. In the validation dataset, the receiver operating characteristics (ROC) were compared between the models trained in the centralized and distributed manner. No difference in ROC was observed with respect to feature selection. The logistic regression coefficients were identical between the methods (absolute difference <10-7). In comparison of the full workflow (feature selection and classification), no significant difference in ROC was found between centralized and distributed models for both studied endpoints (DeLong p > 0.05). In conclusion, both feature selection and classification are feasible in a distributed manner using radiomics data, which opens new possibility for training more reliable radiomics models.
Keyphrases
- big data
- deep learning
- electronic health record
- machine learning
- neural network
- contrast enhanced
- healthcare
- lymph node metastasis
- ejection fraction
- newly diagnosed
- artificial intelligence
- squamous cell carcinoma
- magnetic resonance imaging
- computed tomography
- health information
- high grade
- clinical trial
- magnetic resonance
- optical coherence tomography
- body composition
- positron emission tomography
- dna repair
- free survival