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Constructing and analysing dynamic models with modelbase v1.2.3: a software update.

Marvin van AalstOliver EbenhöhAnna B Matuszyńska
Published in: BMC bioinformatics (2021)
With this new Python software package, which is written in currently one of the most popular programming languages, the user can develop new models and actively profit from the work of others. modelbase enables reproducing and replicating models in a consistent, tractable and expandable manner. Moreover, the expansion of models to their isotopic label-specific versions enables simulating label propagation, thus providing quantitative information regarding network topology and metabolic fluxes.
Keyphrases
  • healthcare
  • high resolution
  • network analysis