Login / Signup

Investigation by DFT Methods of the Damage of Human Serum Albumin Including Amino Acid Derivative Schiff Base Zn(II) Complexes by IR-FEL Irradiation.

Yuika OnamiRyousuke KoyaTakayasu KawasakiHiroki AizawaRyo NakagameYoshito MiyagawaTomoyuki HaraguchiTakashiro AkitsuKoichi TsukiyamaMauricio Alcolea Palafox
Published in: International journal of molecular sciences (2019)
An infrared free electron laser (IR-FEL) can decompose aggregated proteins by excitation of vibrational bands. In this study, we prepared hybrid materials of protein (human serum albumin; HSA) including several new Schiff base Zn(II) complexes incorporating amino acid (alanine and valine) or dipeptide (gly-gly) derivative moieties, which were synthesized and characterized with UV-vis, circular dichroism (CD), and IR spectra. Density functional theory (DFT) and time dependent DFT (TD-DFT) calculations were also performed to investigate vibrational modes of the Zn(II) complexes. An IR-FEL was used to irradiate HSA as well as hybrid materials of HSA-Zn(II) complexes at wavelengths corresponding to imine C=N, amide I, and amide II bands. Analysis of secondary structures suggested that including a Zn(II) complex into HSA led to the structural change of HSA, resulting in a more fragile structure than the original HSA. The result was one of the characteristic features of vibrational excitation of IR-FEL in contrast to electronic excitation by UV or visible light.
Keyphrases
  • density functional theory
  • molecular dynamics
  • amino acid
  • human serum albumin
  • heavy metals
  • magnetic resonance
  • magnetic resonance imaging
  • energy transfer
  • visible light
  • molecular docking
  • high resolution