Liquid-Liquid Phase Separation Is Driven by Large-Scale Conformational Unwinding and Fluctuations of Intrinsically Disordered Protein Molecules.
Anupa MajumdarPriyanka DograShiny MaitySamrat MukhopadhyayPublished in: The journal of physical chemistry letters (2019)
Liquid-liquid phase separation occurs via a multitude of transient, noncovalent, and intermolecular interactions resulting in phase transition of intrinsically disordered proteins/regions (IDPs/IDRs) and other biopolymers into mesoscopic, dynamic, nonstoichiometric, and supramolecular condensates. Here we present a unique case to demonstrate that unusual conformational expansion events coupled with solvation and fluctuations drive phase separation of tau, an IDP associated with Alzheimer's disease. Using intramolecular excimer emission as a powerful proximity readout, we show the unraveling of polypeptide chains within the protein-rich interior environment that can promote critical interchain contacts. Using highly sensitive picosecond time-resolved fluorescence depolarization measurements, we directly capture rapid large-amplitude torsional fluctuations in the extended chains that can control the relay of making-and-breaking of noncovalent intermolecular contacts maintaining the internal fluidity. The interplay of these key molecular parameters can be of prime importance in modulating the mesoscale material property of liquid-like condensates and their maturation into pathological gel-like and solid-like aggregates.
Keyphrases
- energy transfer
- single molecule
- molecular dynamics
- molecular dynamics simulations
- ionic liquid
- protein protein
- quantum dots
- amino acid
- living cells
- resting state
- small molecule
- fluorescent probe
- mass spectrometry
- cerebral ischemia
- cerebrospinal fluid
- functional connectivity
- brain injury
- water soluble
- hyaluronic acid
- wound healing
- mild cognitive impairment
- molecularly imprinted
- subarachnoid hemorrhage