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Engineering Tunable, Low Latency Spatial Computation with Dual Input Quorum Sensing Promoters.

Jure TicaHaobin ChenShulei LuoManman ChenMark Isalan
Published in: ACS synthetic biology (2024)
Quorum sensing signals have evolved for population-level signaling in bacterial communities and are versatile tools for engineering cell-cell signaling in synthetic biology projects. Here, we characterize the spatial diffusion of a palette of quorum sensing signals and find that their diffusion in agar can be predicted from their molecular weight with a simple power law. We also engineer novel dual- and multi-input promoters that respond to quorum-sensing diffusive signals for use in engineered genetic systems. We engineer a promoter scaffold that can be adapted for activation and repression by multiple diffusers simultaneously. Lastly, we combine the knowledge on diffusion dynamics with the novel genetic components to build a new generation of spatial, stripe-forming systems with a simplified design, improved robustness, tuneability, and response time.
Keyphrases
  • copy number
  • genome wide
  • dna methylation
  • single cell
  • cell therapy
  • healthcare
  • gene expression
  • transcription factor
  • stem cells
  • mesenchymal stem cells
  • quality improvement
  • bone marrow
  • tissue engineering