Cascade Synthesis of Fluorinated Spiroheterocyclic Scaffolding for Peptidic Macrobicycles.
Angel MendozaSalvador J BernardinoMorris J DweckIsabel ValenciaDeclan EvansHaowen TianWilliam LeeYu LiKendall N HoukPatrick G HarranPublished in: Journal of the American Chemical Society (2023)
Octafluorocyclopentene (OFCP) engages linear, unprotected peptides in polysubstitution cascades that generate complex fluorinated polycycles. The reactions occur in a single flask at 0-25 °C and require no catalysts or heavy metals. OFCP can directly polycyclize linear sequences using native functionality, or fluorospiroheterocyclic intermediates can be intercepted with exogenous nucleophiles. The latter tactic generates molecular hybrids composed of peptides, sugars, lipids, and heterocyclic components. The platform can create stereoisomers of both single- and double-looped macrocycles. Calculations indicate that the latter can mimic diverse protein surface loops. Subsets of the molecules have low energy conformers that shield the polar surface area through intramolecular hydrogen bonding. A significant fraction of OFCP-derived macrocycles tested show moderate to high passive permeability in parallel artificial membrane permeability assays.
Keyphrases
- heavy metals
- amino acid
- high throughput
- endothelial cells
- risk assessment
- density functional theory
- molecular dynamics
- molecular dynamics simulations
- high intensity
- health risk assessment
- protein protein
- highly efficient
- peripheral blood
- health risk
- binding protein
- ionic liquid
- small molecule
- metal organic framework
- monte carlo