Clinical advantage of targeted sequencing for unbiased tumor mutational burden estimation in samples with low tumor purity.
Tae Hee HongHongui ChaJoon Ho ShimBoram LeeJongsuk ChungChung LeeNayoung K D KimYoon-La ChoiSoohyun HwangYoomi LeeSehhoon ParkHyun Ae JungJi-Yeon KimYeon Hee ParkJong-Mu SunJin Seok AhnMyung-Ju AhnKeunchil ParkSe-Hoon LeeWoong-Yang ParkPublished in: Journal for immunotherapy of cancer (2021)
Our data suggest that TMB characterization with targeted deep sequencing might have potential strength in predicting ICI responsiveness due to its enhanced sensitivity for hard-to-detect variants at low-allele fraction. Therefore, pTMB could act as an invaluable biomarker in the setting of both clinical trials and practice outside of trials based on its reliable performance in mitigating the purity-related bias.