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SynBot: An open-source image analysis software for automated quantification of synapses.

Justin T SavageJuan J RamirezW Christopher RisherDolores IralaCagla Eroglu
Published in: bioRxiv : the preprint server for biology (2023)
allows for the effective identification of synaptic structures. Previous methods for quantitative analysis of these images were time-consuming, required extensive user training, and the source code could not be easily modified. Here, we describe SynBot, a new open-source tool that automates the synapse quantification process, decreases the requirement for user training, and allows for easy modifications to the code.
Keyphrases
  • deep learning
  • high resolution
  • virtual reality
  • machine learning
  • high throughput
  • optical coherence tomography
  • mass spectrometry
  • bioinformatics analysis