Different genetic mechanisms mediate spontaneous versus UVR-induced malignant melanoma.
Blake FergusonHerlina Y HandokoPamela MukhopadhyayArash ChitsazanLois BalmerGrant MorahanGraeme J WalkerPublished in: eLife (2019)
Genetic variation conferring resistance and susceptibility to carcinogen-induced tumorigenesis is frequently studied in mice. We have now turned this idea to melanoma using the collaborative cross (CC), a resource of mouse strains designed to discover genes for complex diseases. We studied melanoma-prone transgenic progeny across seventy CC genetic backgrounds. We mapped a strong quantitative trait locus for rapid onset spontaneous melanoma onset to Prkdc, a gene involved in detection and repair of DNA damage. In contrast, rapid onset UVR-induced melanoma was linked to the ribosomal subunit gene Rrp15. Ribosome biogenesis was upregulated in skin shortly after UVR exposure. Mechanistically, variation in the 'usual suspects' by which UVR may exacerbate melanoma, defective DNA repair, melanocyte proliferation, or inflammatory cell infiltration, did not explain melanoma susceptibility or resistance across the CC. Instead, events occurring soon after exposure, such as dysregulation of ribosome function, which alters many aspects of cellular metabolism, may be important.
Keyphrases
- dna damage
- genome wide
- dna repair
- skin cancer
- diabetic rats
- high glucose
- oxidative stress
- copy number
- loop mediated isothermal amplification
- drug induced
- dna methylation
- basal cell carcinoma
- genome wide identification
- single cell
- magnetic resonance
- gene expression
- metabolic syndrome
- stem cells
- magnetic resonance imaging
- adipose tissue
- computed tomography
- transcription factor
- sensitive detection
- genome wide association study
- wound healing
- quantum dots
- contrast enhanced