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Generating segmentation masks of herbarium specimens and a data set for training segmentation models using deep learning.

Alexander E WhiteRebecca B DikowMakinnon BaughAbigail JenkinsPaul B Frandsen
Published in: Applications in plant sciences (2020)
The application of deep learning in herbarium sciences requires transparent and systematic protocols for generating training data so that these labor-intensive resources can be generalized to other deep learning applications. Segmentation ground-truth masks are hard-won data, and we share these data and the model openly in the hopes of furthering model training and transfer learning opportunities for broader herbarium applications.
Keyphrases
  • deep learning
  • convolutional neural network
  • artificial intelligence
  • electronic health record
  • big data
  • machine learning
  • data analysis