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Complete chloroplast genome sequence of Maytenus guangxiensis (celastraceae), a rare and critically endangered species endemic to China.

Yancai ShiBingbing Liu
Published in: Mitochondrial DNA. Part B, Resources (2020)
Maytenus guangxiensis (Celastraceae) is a rare and critically endangered species endemic to China. Here, we first report and characterize its complete chloroplast genome sequence based on Illumina paired-end sequencing data. The complete plastid genome was 157,102 bp, which contained inverted repeats (IR) of 26,476 bp separated by a large single-copy (LSC) and a small single copy (SSC) of 85,559 bp and 18,591 bp, respectively. The cpDNA contains 130 genes, comprising 85 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The overall GC content of the plastome is 37.3%. The phylogenetic analysis of 19 selected chloroplast genomes demonstrated that M. guangxiensis was close to the species Catha edulis.
Keyphrases
  • genome wide
  • bioinformatics analysis
  • genome wide identification
  • dna methylation
  • single cell
  • machine learning
  • big data
  • mass spectrometry
  • binding protein
  • protein protein