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MegaR: an interactive R package for rapid sample classification and phenotype prediction using metagenome profiles and machine learning.

Eliza DhungelYassin MreyoudHo-Jin GwakAhmad RajehMina RhoTae-Hyuk Ahn
Published in: BMC bioinformatics (2021)
Metagenomic sample classification and phenotype prediction is important particularly when it applies to a diagnostic method for identifying and predicting microbe-related human diseases. MegaR provides various interactive visualizations for user to build an accurate machine-learning model without difficulty. Unknown sample prediction with a properly trained model using MegaR will enhance researchers to identify the sample property in a fast turnaround time.
Keyphrases
  • machine learning
  • deep learning
  • artificial intelligence
  • big data
  • wastewater treatment