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Alteration of the N 6 -methyladenosine epitranscriptomic profile in synthetic phthalate-treated human induced pluripotent stem cell-derived endothelial cells.

Jordan JousmaZhenbo HanGege YanSarath Babu NukalaYoujeong KwonHoai Huong Thi LeYa LiSang-Bing OngWon Hee LeeSang-Ging Ong
Published in: Epigenomics (2022)
Background: This study aimed to characterize the N 6 -methyladenosine epitranscriptomic profile induced by mono(2-ethylhexyl) phthalate (MEHP) exposure using a human-induced pluripotent stem cell-derived endothelial cell model. Methods: A multiomic approach was employed by performing RNA sequencing in parallel with an N 6 -methyladenosine-specific microarray to identify mRNAs, lncRNAs, and miRNAs affected by MEHP exposure. Results: An integrative multiomic analysis identified relevant biological features affected by MEHP, while functional assays provided a phenotypic characterization of these effects. Transcripts regulated by the epitranscriptome were validated with quantitative PCR and methylated RNA immunoprecipitation. Conclusion: The authors' profiling of the epitranscriptome expands the scope of toxicological insights into known environmental toxins to under surveyed cellular contexts and emerging domains of regulation and is, therefore, a valuable resource to human health.
Keyphrases
  • endothelial cells
  • high glucose
  • human health
  • risk assessment
  • single cell
  • vascular endothelial growth factor
  • diabetic rats
  • climate change
  • high throughput
  • mass spectrometry
  • network analysis
  • genome wide analysis