Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm.

Juan P RomeroMaría Ortiz-EstévezAnder MuniateguiSoraya CarrancioFernando J de MiguelFernando CarazoLuis M MontuengaRemco LoosRubén PíoMatthew W B TrotterAngel Rubio

Published in: BMC genomics (2018)

Our results suggest, therefore, that exon-junction arrays are a viable alternative to RNA-seq for detection of alternative splicing events when focusing on well-described transcriptional regions.

Keyphrases

rna seq
single cell
loop mediated isothermal amplification
high throughput
real time pcr
label free
machine learning
gene expression
deep learning
transcription factor