Polymorphism of Saccharomyces cerevisiae Strains in DNA Metabolism Genes.
Anna S ZhukArtem G LadaYouri I PavlovPublished in: International journal of molecular sciences (2023)
Baker's yeast, S. cerevisiae , is an excellent model organism exploited for molecular genetic studies of the mechanisms of genome stability in eukaryotes. Genetic peculiarities of commonly used yeast strains impact the processes of DNA replication, repair, and recombination (RRR). We compared the genomic DNA sequence variation of the five strains that are intensively used for RRR studies. We used yeast next-generation sequencing data to detect the extent and significance of variation in 183 RRR genes. We present a detailed analysis of the differences that were found even in closely related strains. Polymorphisms of common yeast strains should be considered when interpreting the outcomes of genome stability studies, especially in cases of discrepancies between laboratories describing the same phenomena.
Keyphrases
- saccharomyces cerevisiae
- genome wide
- escherichia coli
- copy number
- circulating tumor
- single molecule
- cell free
- dna methylation
- cell wall
- gene expression
- case control
- skeletal muscle
- dna damage
- bioinformatics analysis
- artificial intelligence
- dna repair
- weight loss
- glycemic control
- adipose tissue
- machine learning
- nucleic acid
- insulin resistance
- oxidative stress