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First draft genome of Thecaphora frezii, causal agent of peanut smut disease.

Renee S AriasCinthia ConfortoValerie A OrnerEdgardo J CarloniJuan H SoaveAlicia N MassaMarshall C LambNelson Bernardi-LimaAlejandro M Rago
Published in: BMC genomic data (2023)
Thecaphora frezii isolate IPAVE 0401 (here referred as T.f.B7) was obtained from a single hyphal-tip culture, its DNA was sequenced using Pacific Biosciences Sequel II (PacBio) and Illumina NovaSeq6000 (Nova). Data from both sequencing platforms were combined and the de novo assembling estimated a 29.3 Mb genome size. Completeness of the genome examined using Benchmarking Universal Single-Copy Orthologs (BUSCO) showed the assembly had 84.6% of the 758 genes in fungi_odb10.
Keyphrases
  • genome wide
  • dna methylation
  • circulating tumor
  • single cell
  • electronic health record
  • single molecule
  • cell free
  • gene expression
  • machine learning
  • transcription factor
  • data analysis
  • circulating tumor cells