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Title evaluation of FluSight influenza forecasting in the 2021-22 and 2022-23 seasons with a new target laboratory-confirmed influenza hospitalizations.

Sarabeth M MathisAlexander E WebberTomás M LeónErin L MurrayMonica SunLauren A WhiteLogan C BrooksAlden GreenAddison J HuRoni RosenfeldDmitry ShemetovRyan J TibshiraniDaniel J McDonaldSasikiran KandulaSen PeiRami YaariTeresa K YamanaJeffrey L ShamanPulak AgarwalSrikar BalusuGautham GururajanHarshavardhan KamarthiB Aditya PrakashRishi RamanZhiyuan ZhaoAlexander RodríguezAkilan MeiyappanShalina OmarPrasith BaccamHeidi L GurungBrad T SuchoskiSteve A StageMarco AjelliAllisandra G KummerMaria LitvinovaPaulo C VenturaSpencer WadsworthJarad NiemiErica CarcelenAlison L HillSara L LooClifton D McKeeKoji SatoClaire SmithShaun A TrueloveSung-Mok JungJoseph Chadi LemaitreJustin LesslerThomas C McAndrewWenxuan YeNikos I BosseWilliam S HlavacekYen Ting LinAbhishek MallelaGraham C GibsonYe ChenShelby M LammJaechoul LeeRichard G PosnerAmanda C PerofskyCecile ViboudLeonardo ClementeFred Sun LuAustin G MeyerMauricio SantillanaMatteo ChinazziJessica T DavisKunpeng MuAna Pastore Y PionttiAlessandro VespignaniXinyue XiongMichal Ben-NunPete RileyJames A TurtleChis Hulme-LoweShakeel JessaV P NagrajStephen D TurnerDesiree WilliamsAvranil BasuJohn M DrakeSpencer J FoxEhsan SuezMonica G CojocaruEdward W ThommesEstee Y CramerAaron GerdingAriane StarkEvan L RayNicholas G ReichLi ShandrossNutcha WattanachitYijin WangMartha W ZornMajd Al AawarAjitesh SrivastavaLauren Ancel MeyersAniruddha AdigaBenjamin HurtGursharn KaurBryan Leroy LewisMadhav MaratheSrinivasan VenkatramananPatrick ButlerAndrew FarabowNaren RamakrishnanNikhil MuralidharCarrie ReedMatthew BiggerstaffRebecca K Borchering
Published in: Nature communications (2024)
Accurate forecasts can enable more effective public health responses during seasonal influenza epidemics. For the 2021-22 and 2022-23 influenza seasons, 26 forecasting teams provided national and jurisdiction-specific probabilistic predictions of weekly confirmed influenza hospital admissions for one-to-four weeks ahead. Forecast skill is evaluated using the Weighted Interval Score (WIS), relative WIS, and coverage. Six out of 23 models outperform the baseline model across forecast weeks and locations in 2021-22 and 12 out of 18 models in 2022-23. Averaging across all forecast targets, the FluSight ensemble is the 2 nd most accurate model measured by WIS in 2021-22 and the 5 th most accurate in the 2022-23 season. Forecast skill and 95% coverage for the FluSight ensemble and most component models degrade over longer forecast horizons. In this work we demonstrate that while the FluSight ensemble was a robust predictor, even ensembles face challenges during periods of rapid change.
Keyphrases
  • public health
  • high resolution
  • convolutional neural network
  • machine learning
  • neural network
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  • quality improvement
  • network analysis
  • quantum dots
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  • infectious diseases