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Complete genome sequences of Clostridioides difficile surveillance isolates representing the top 10 ribotypes from the Emerging Infections Program, United States, 2016.

Michelle AdamczykNicholas VlachosErin BreakerGiulia OraziAshley L PaulickLori A RoweGillian McAllisterMaría-José MachadoLauren KorhonenAlice Y GuhJ Kamile RasheedMaria KarlssonSusannah L McKayJoseph D LutgringAmy S Gargisnull null
Published in: Microbiology resource announcements (2024)
Ten Clostridioides difficile isolates representing the top 10 ribotypes collected in 2016 through the Emerging Infections Program underwent long-read sequencing to obtain high-quality reference genome assemblies. These isolates are publicly available through the CDC & FDA Antibiotic Resistance Isolate Bank.
Keyphrases
  • clostridium difficile
  • genetic diversity
  • quality improvement
  • genome wide
  • public health
  • single cell
  • gene expression
  • dna methylation