Significant association between genes encoding virulence factors with antibiotic resistance and phylogenetic groups in community acquired uropathogenic Escherichia coli isolates.
Zahra YazdanpourOmid TadjrobehkarMotahareh ShahkhahPublished in: BMC microbiology (2020)
Increased resistance to first line drugs prescribed for UTIs were detected in CA-UPEC isolates in our study.. Minimal resistance was observed against nitrofurantoin, fosfomycin and imipenem. Therefore, they are introduced for application in empirical therapy of UTIs. Fosfomycin may be the most effective antibiotic agent against highly resistant UPEC isolates. The presence of the ompA, malX and hlyA genes were significantly associated with resistance to different antibiotic agents. We assume that the ability of UPEC isolates to upgrade their antibiotic resistance capacity may occurs in compliance with the preliminary existence of specific virulence associated genes. But, more investigation with higher number of bacterial isolates, further virulence associated genes and comparison of gene pools from CA-UPEC isolates with HA-UPEC are proposed to confirm these finding and discovering new aspects of this association.
Keyphrases
- escherichia coli
- genome wide
- genetic diversity
- biofilm formation
- genome wide identification
- pseudomonas aeruginosa
- staphylococcus aureus
- bioinformatics analysis
- antimicrobial resistance
- healthcare
- genome wide analysis
- copy number
- mental health
- dna methylation
- cystic fibrosis
- klebsiella pneumoniae
- bone marrow
- urinary tract infection
- replacement therapy