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Combining laser-assisted microdissection (LAM) and RNA-seq allows to perform a comprehensive transcriptomic analysis of epidermal cells of Arabidopsis embryo.

Kaori SakaiLudivine TaconnatNero BorregaJennifer YansouniVéronique BrunaudChristine Paysant-Le RouxEtienne DelannoyMarie-Laure Martin MagnietteLoïc LepiniecJean Denis FaureSandrine BalzergueBertrand Dubreucq
Published in: Plant methods (2018)
This technical advance unlocks some current limitations of transcriptomic analyses and allows to investigate further and efficiently new biological questions for which only a very small amounts of cells need to be isolated. For instance, it paves the way to increasing the spatial accuracy of regulatory networks in developing small embryo of Arabidopsis or other plant tissues.
Keyphrases
  • rna seq
  • single cell
  • induced apoptosis
  • transcription factor
  • cell cycle arrest
  • oxidative stress
  • cell death
  • signaling pathway
  • cell wall
  • pregnant women