Login / Signup

The complete chloroplast genome of the Egyptian henbane ( Hyoscyamus muticus L., Solanaceae).

Mahmoud MagdyEsraa Attia El-SherbenyAgripina Ramírez
Published in: Mitochondrial DNA. Part B, Resources (2022)
Egyptian henbane ( Hyoscyamus muticus L. Mant. Pl. 1767) is an important medicinal plant of the family Solanaceae. Its complete chloroplast (cp) genome was assembled using Illumina high-throughput sequencing technology to contribute to its conservation genetics studies. Here, we report the complete sequence of the chloroplast genome of H. muticus . The cp genome was 156,271 bp in length with an asymmetric base composition (30.9% A, 18.9% C, 18.6% G and 31.6% T). It encodes 132 genes comprising 87 protein-coding genes, 29 tRNA genes, and 8 rRNA genes. The overall GC content of the H. muticus chloroplast genome was 37.5%, and the corresponding values in the large single-copy (LSC), the small single-copy (SSC), and the inverted repeat (IR) regions were 35.5%, 31.5%, and 43.0%, respectively. The complete chloroplast genome sequence was deposited to the GenBank (NCBI, Accession number: MZ450974). The maximum likelihood phylogenetic analysis showed that the H. muticus and H. niger were clustered into one clade with strong support values, indicating their closer relationship.
Keyphrases
  • genome wide
  • arabidopsis thaliana
  • dna methylation
  • high throughput sequencing
  • bioinformatics analysis
  • genome wide analysis
  • transcription factor
  • small molecule
  • mass spectrometry
  • gas chromatography