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Tracing key genes associated with the Pinctada margaritifera albino phenotype from juvenile to cultured pearl harvest stages using multiple whole transcriptome sequencing.

Pauline AuffretJérémy Le LuyerManaarii Sham KouaVirgile QuillienChin-Long Ky
Published in: BMC genomics (2020)
This multiple RNA-seq approach provided new knowledge about genes associated with the P. margaritifera albino phenotype, highlighting: 1) new molecular pathways, such as the Notch signalling pathway in pigmentation, 2) associated SNP markers with biomineraliszation gene of interest like Pif for marker-assisted selection and prevention of inbreeding, and 3) alternative gene splicing for melanin biosynthesis implicating tyrosinase.
Keyphrases
  • rna seq
  • single cell
  • genome wide
  • copy number
  • dna methylation
  • healthcare
  • genome wide identification
  • cell proliferation
  • endothelial cells
  • gene expression
  • high density
  • single molecule