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Metagenomic functional profiling: to sketch or not to sketch?

Mahmudur Rahman HeraShaopeng LiuWei WeiJudith S RodriguezChunyu MaDavid Koslicki
Published in: Bioinformatics (Oxford, England) (2024)
This fast and lightweight metagenomic functional profiler is freely available and can be accessed here: https://github.com/KoslickiLab/fmh-funprofiler. All scripts of the analyses we present in this manuscript can be found on GitHub.
Keyphrases
  • antibiotic resistance genes
  • microbial community
  • wastewater treatment